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  1. We developed an analytic strategy that correlates gene expression and clinical outcomes as a means to identify novel candidate oncogenes operative in breast cancer. This analysis, followed by functional charac...

    Authors: Yi Fang Lee, Lance David Miller, Xiu Bin Chan, Michael A Black, Brendan Pang, Chee Wee Ong, Manuel Salto-Tellez, Edison T Liu and Kartiki V Desai
    Citation: Breast Cancer Research 2012 14:3001

    The Erratum to this article has been published in Breast Cancer Research 2017 19:42

  2. Breast cancers of different molecular subtypes have different survival rates. The goal of this study was to identify patients at high risk for local-regional recurrence according to response to neoadjuvant che...

    Authors: Abigail S Caudle, Tse-Kuan Yu, Susan L Tucker, Isabelle Bedrosian, Jennifer K Litton, Ana M Gonzalez-Angulo, Karen Hoffman, Funda Meric-Bernstam, Kelly K Hunt, Thomas A Buchholz and Elizabeth A Mittendorf
    Citation: Breast Cancer Research 2012 14:R83
  3. Tumor-associated macrophages, which are derived from the infiltration of circulating bone marrow-derived monocytes, consist primarily of a polarized M2 macrophage (M2-MÏ•) population and are associated with poo...

    Authors: Han Jin Cho, Jae In Jung, Do Young Lim, Gyoo Taik Kwon, Song Her, Jong Hoon Park and Jung Han Yoon Park
    Citation: Breast Cancer Research 2012 14:R81
  4. miRNAs are very important regulators in biological processes such as development, cellular differentiation, and carcinogenesis. Given the important role of miRNAs in tumorigenesis and development, it is worth ...

    Authors: Chang Hui, Fu Yujie, Yuan Lijia, Yi Long, Xu Hongxia, Zhou Yong, Zhu Jundong, Zhang Qianyong and Mi Mantian
    Citation: Breast Cancer Research 2012 14:R80
  5. Of the more than one million global cases of breast cancer diagnosed each year, approximately fifteen percent are characterized as triple-negative, lacking the estrogen, progesterone, and Her2/neu receptors. L...

    Authors: Chandra R Tate, Lyndsay V Rhodes, H Chris Segar, Jennifer L Driver, F Nell Pounder, Matthew E Burow and Bridgette M Collins-Burow
    Citation: Breast Cancer Research 2012 14:R79
  6. The majority of breast tumors at primary diagnosis are estrogen receptor positive (ER+). Estrogen (E) mediates its effects by binding to the ER. Therapies targeting the estrogenic stimulation of tumor growth r...

    Authors: Marion T Weigel, Zara Ghazoui, Anita Dunbier, Sunil Pancholi, Mitch Dowsett and Lesley-Ann Martin
    Citation: Breast Cancer Research 2012 14:R78
  7. Experimental and clinical evidence points to a critical role of progesterone and the nuclear progesterone receptor (PR) in controlling mammary gland tumorigenesis. However, the molecular mechanisms of progeste...

    Authors: Martin A Rivas, Leandro Venturutti, Yi-Wen Huang, Roxana Schillaci, Tim Hui-Ming Huang and Patricia V Elizalde
    Citation: Breast Cancer Research 2012 14:R77
  8. Associations of hormone-receptor positive breast cancer with excess adiposity are reasonably well characterized; however, uncertainty remains regarding the association of body mass index (BMI) with hormone-rec...

    Authors: Rebecca Ritte, Annekatrin Lukanova, Franco Berrino, Laure Dossus, Anne Tjønneland, Anja Olsen, Thure Filskov Overvad, Kim Overvad, Françoise Clavel-Chapelon, Agnès Fournier, Guy Fagherazzi, Sabine Rohrmann, Birgit Teucher, Heiner Boeing, Krasimira Aleksandrova, Antonia Trichopoulou…
    Citation: Breast Cancer Research 2012 14:R76
  9. The re-emergence of the tumour growth factor-beta (TGF-beta)-related embryonic morphogen Nodal has recently been reported in several different human cancers. In this study, we examined the expression of Nodal ...

    Authors: Luigi Strizzi, Katharine M Hardy, Naira V Margaryan, David W Hillman, Elisabeth A Seftor, Beiyun Chen, Xochiquetzal J Geiger, E Aubrey Thompson, Wilma L Lingle, Cathy A Andorfer, Edith A Perez and Mary JC Hendrix
    Citation: Breast Cancer Research 2012 14:R75
  10. Identification of molecules and their effectors has led to new therapies designed to specifically inhibit pathways in molecularly defined breast cancer subtypes. An orphan nuclear receptor, estrogen-related re...

    Authors: Aleksandra M Ochnik and Douglas Yee
    Citation: Breast Cancer Research 2012 14:309
  11. CT10 regulator of kinase (Crk) adaptor proteins (CrkI, CrkII and CrkL) play a role in integrating signals for migration and invasion of highly malignant breast cancer cell lines. This has important implication...

    Authors: Kelly E Fathers, Emily S Bell, Charles V Rajadurai, Sean Cory, Hong Zhao, Anna Mourskaia, Dongmei Zuo, Jason Madore, Anie Monast, Anne-Marie Mes-Masson, Andree-Anne Grosset, Louis Gaboury, Michael Hallet, Peter Siegel and Morag Park
    Citation: Breast Cancer Research 2012 14:R74
  12. The chromodomain helicase DNA binding protein 5 (CHD5) has recently been identified as a tumor suppressor in a mouse model. The CHD5 locus at 1p36 is deleted, and its mutation has been detected in breast cancer. ...

    Authors: Xiao Wu, Zhengmao Zhu, Weidong Li, Xiaoying Fu, Dan Su, Liya Fu, Zhiqian Zhang, Ang Luo, Xiaodong Sun, Li Fu and Jin-Tang Dong
    Citation: Breast Cancer Research 2012 14:R73
  13. Centromere protein A (CENP-A), an essential centromere protein, has been associated with high grade cancers. This study was undertaken to determine if CENP-A is a prognostic factor for breast cancer patients n...

    Authors: Susan L McGovern, Yuan Qi, Lajos Pusztai, William F Symmans and Thomas A Buchholz
    Citation: Breast Cancer Research 2012 14:R72
  14. Increasing evidence supports the view that the detection of circulating tumor cells (CTCs) predicts outcomes of nonmetastatic breast cancer patients. CTCs differ genetically from the primary tumor and may cont...

    Authors: Rosa Nadal, Ana Fernandez, Pedro Sanchez-Rovira, Marta Salido, María Rodríguez, José Luis García-Puche, Marta Macià, Josep Maria Corominas, Miguel Delgado-Rodriguez, Lucas Gonzalez, Joan Albanell, Mónica Fernández, Francesc Solé, José Antonio Lorente and María José Serrano
    Citation: Breast Cancer Research 2012 14:R71
  15. Pre-clinical data suggest p53-dependent anthracycline-induced apoptosis and p53-independent taxane activity. However, dedicated clinical research has not defined a predictive role for TP53 gene mutations. The aim...

    Authors: Lynnette Fernández-Cuesta, Catherine Oakman, Priscila Falagan-Lotsch, Ke-seay Smoth, Emmanuel Quinaux, Marc Buyse, M Stella Dolci, Evandro De Azambuja, Pierre Hainaut, Patrizia Dell'Orto, Denis Larsimont, Prudence A Francis, John Crown, Martine Piccart-Gebhart, Giuseppe Viale, Angelo Di Leo…
    Citation: Breast Cancer Research 2012 14:R70
  16. Randomized adjuvant trials continue to show significant reductions in distant recurrence and death for early-stage women treated with adjuvant trastuzumab. BCIRG-006 showed superior disease-free and overall su...

    Authors: Rachel C Jankowitz and Adam M Brufsky
    Citation: Breast Cancer Research 2012 14:308
  17. The RAD21 gene encodes a key component of the cohesin complex, which is essential for chromosome segregation, and together with BRCA1 and BRCA2, for high-fidelity DNA repair by homologous recombination. Although ...

    Authors: Max Yan, Huiling Xu, Nic Waddell, Kristy Shield-Artin, Izhak Haviv, Michael J McKay and Stephen B Fox
    Citation: Breast Cancer Research 2012 14:R69
  18. Triple negative breast cancer (TNBC) is very aggressive and currently has no specific therapeutic targets, such as hormone receptors or human epidermal growth factor receptor type 2 (HER2); therefore, prognosi...

    Authors: Ling-Ming Tseng, Chun-Yu Liu, Kung-Chi Chang, Pei-Yi Chu, Chung-Wai Shiau and Kuen-Feng Chen
    Citation: Breast Cancer Research 2012 14:R68
  19. The neuron-glial antigen 2 (NG2) proteoglycan promotes pericyte recruitment and mediates pericyte interaction with endothelial cells. In the absence of NG2, blood vessel development is negatively impacted in s...

    Authors: Krissa Gibby, Weon-Kyoo You, Kuniko Kadoya, Hildur Helgadottir, Lawrence JT Young, Lesley G Ellies, Yunchao Chang, Robert D Cardiff and William B Stallcup
    Citation: Breast Cancer Research 2012 14:R67
  20. Perp is a transcriptional target of both p53 during DNA damage-induced apoptosis and p63 during stratified epithelial development. Perp-/- mice exhibit postnatal lethality associated with dramatic blistering of t...

    Authors: Rachel L Dusek, Jamie L Bascom, Hannes Vogel, Sylvain Baron, Alexander D Borowsky, Mina J Bissell and Laura D Attardi
    Citation: Breast Cancer Research 2012 14:R65
  21. An emerging clinical modality called proton magnetic resonance spectroscopy (1H-MRS) enables the non-invasive in vivo assessment of tissue metabolism and is demonstrating applications in improving the specificity...

    Authors: Jonathan KP Begley, Thomas W Redpath, Patrick J Bolan and Fiona J Gilbert
    Citation: Breast Cancer Research 2012 14:207
  22. Involution of terminal duct lobular units (TDLUs), the structures that give rise to most breast cancers, has been associated with reduced breast cancer risk. Data suggest that the etiology and pathogenesis of ...

    Authors: Xiaohong R Yang, Jonine D Figueroa, Roni T Falk, Hong Zhang, Ruth M Pfeiffer, Stephen M Hewitt, Jolanta Lissowska, Beata Peplonska, Louise Brinton, Montserrat Garcia-Closas and Mark E Sherman
    Citation: Breast Cancer Research 2012 14:R64
  23. Cis-acting regulatory single nucleotide polymorphisms (SNPs) at specific loci may modulate penetrance of germline mutations at the same loci by introducing different levels of expression of the wild-type allele. ...

    Authors: Ana-Teresa Maia, Antonis C Antoniou, Martin O'Reilly, Shamith Samarajiwa, Mark Dunning, Christiana Kartsonaki, Suet-Feung Chin, Christina N Curtis, Lesley McGuffog, Susan M Domchek, Douglas F Easton, Susan Peock, Debra Frost, D Gareth Evans, Ros Eeles, Louise Izatt…
    Citation: Breast Cancer Research 2012 14:R63
  24. Although human epidermal growth factor receptor 2 (HER2) positive or estrogen receptor (ER) positive breast cancers are treated with clinically validated anti-HER2 or anti-estrogen therapies, intrinsic and acq...

    Authors: Qing Cheng, Jeffrey T Chang, Joseph Geradts, Leonard M Neckers, Timothy Haystead, Neil L Spector and H Kim Lyerly
    Citation: Breast Cancer Research 2012 14:R62
  25. The gene expression profiles of cancer cells are closely related to their aggressiveness and metastatic potential. Antibody-based immunohistochemistry (IHC) of tissue specimens is a common method of identifyin...

    Authors: Kohei Sano, Makoto Mitsunaga, Takahito Nakajima, Peter L Choyke and Hisataka Kobayashi
    Citation: Breast Cancer Research 2012 14:R61
  26. Germline TP53 mutations cause an increased risk to early-onset breast cancer in Li-Fraumeni syndrome (LFS) families and the majority of carriers identified through breast cancer cohorts have LFS or Li-Fraumeni-li...

    Authors: Daphne SC Lee, Sook-Yee Yoon, Lai Meng Looi, Peter Kang, In Nee Kang, Kavitta Sivanandan, Hany Ariffin, Meow Keong Thong, Kin Fah Chin, Nur Aishah Mohd Taib, Cheng-Har Yip and Soo-Hwang Teo
    Citation: Breast Cancer Research 2012 14:R66
  27. In response to gamma-irradiation (IR)-induced double-strand DNA breaks, cells undergo cell-cycle arrest, allowing time for DNA repair before reentering the cell cycle. G2/M checkpoint activation involves activati...

    Authors: Ying Yan, Patrick M Greer, Phu T Cao, Ryan H Kolb and Kenneth H Cowan
    Citation: Breast Cancer Research 2012 14:R60
  28. BRCA1 is a tumor suppressor with critical roles in the maintenance of genomic stability. It encodes a large protein with an amino-terminal RING domain that possesses ubiquitin-ligase activity. Given the occurrenc...

    Authors: Andrew EH Elia and Stephen J Elledge
    Citation: Breast Cancer Research 2012 14:306
  29. Although mammographic density is an established risk factor for breast cancer, its use is limited in clinical practice because of a lack of automated and standardized measurement methods. The aims of this stud...

    Authors: Lothar Häberle, Florian Wagner, Peter A Fasching, Sebastian M Jud, Katharina Heusinger, Christian R Loehberg, Alexander Hein, Christian M Bayer, Carolin C Hack, Michael P Lux, Katja Binder, Matthias Elter, Christian Münzenmayer, Rüdiger Schulz-Wendtland, Martina Meier-Meitinger, Boris R Adamietz…
    Citation: Breast Cancer Research 2012 14:R59
  30. American women of African ancestry (AA) are more likely than European Americans (EA) to have estrogen receptor (ER)-negative breast cancer. 25-hydroxyvitamin D (25OHD) is low in AAs, and was associated with ER...

    Authors: Song Yao, Gary Zirpoli, Dana H Bovbjerg, Lina Jandorf, Chi Chen Hong, Hua Zhao, Lara E Sucheston, Li Tang, Michelle Roberts, Gregory Ciupak, Warren Davis, Helena Hwang, Candace S Johnson, Donald L Trump, Susan E McCann, Foluso Ademuyiwa…
    Citation: Breast Cancer Research 2012 14:R58
  31. Gene amplification of CCND1 is observed in a subgroup of breast cancers with poor prognosis, whereas overexpression of the protein cyclin D1 has been linked to both worse and better clinical outcome. CCND1 amplif...

    Authors: Katja Lundgren, Matthew Brown, Silvia Pineda, Jack Cuzick, Janine Salter, Lila Zabaglo, Anthony Howell, Mitch Dowsett and Göran Landberg
    Citation: Breast Cancer Research 2012 14:R57
  32. Although approximately 25 common genetic susceptibility loci have been identified to be independently associated with breast cancer risk through genome-wide association studies (GWAS), the genetic risk variant...

    Authors: Hyung-cheol Kim, Ji-Young Lee, Hyuna Sung, Ji-Yeob Choi, Sue K Park, Kyoung-Mu Lee, Young Jin Kim, Min Jin Go, Lian Li, Yoon Shin Cho, Miey Park, Dong-Joon Kim, Ji Hee Oh, Jun-Woo Kim, Jae-Pil Jeon, Soon-Young Jeon…
    Citation: Breast Cancer Research 2012 14:R56
  33. Breast cancers are increasingly recognized as heterogeneous based on expression of receptors for estrogen (ER), progesterone (PR), and human epidermal growth factor receptor 2 (HER2). Triple-negative tumors (ER-/...

    Authors: Theresa HM Keegan, Mindy C DeRouen, David J Press, Allison W Kurian and Christina A Clarke
    Citation: Breast Cancer Research 2012 14:R55
  34. A younger age at menarche and an older age at menopause are well established risk factors for breast cancer. Recent genome-wide association studies have identified several novel genetic loci associated with th...

    Authors: Chunyan He, Daniel I Chasman, Jill Dreyfus, Shih-Jen Hwang, Rikje Ruiter, Serena Sanna, Julie E Buring, Lindsay Fernández-Rhodes, Nora Franceschini, Susan E Hankinson, Albert Hofman, Kathryn L Lunetta, Giuseppe Palmieri, Eleonora Porcu, Fernando Rivadeneira, Lynda M Rose…
    Citation: Breast Cancer Research 2012 14:R54
  35. The 19q12 locus is amplified in a subgroup of oestrogen receptor (ER)-negative grade III breast cancers. This amplicon comprises nine genes, including cyclin E1 (CCNE1), which has been proposed as its 'driver'. T...

    Authors: Rachael Natrajan, Alan Mackay, Paul M Wilkerson, Maryou B Lambros, Daniel Wetterskog, Monica Arnedos, Kai-Keen Shiu, Felipe C Geyer, Anita Langerød, Bas Kreike, Fabien Reyal, Hugo M Horlings, Marc J van de Vijver, Jose Palacios, Britta Weigelt and Jorge S Reis-Filho
    Citation: Breast Cancer Research 2012 14:R53
  36. In this pre-clinical in vitro study conducted in estrogen receptor positive (ER+) breast cancer cells, we have characterized the effects of insulin-like growth factor I (IGF-1) on the cytostatic and cytotoxic act...

    Authors: Sudharsan Periyasamy-Thandavan, Suchreet Takhar, Adam Singer, Michael Robert Dohn, William Hutch Jackson, April Eve Welborn, Derek LeRoith, Mario Marrero, Muthusamy Thangaraju, Shuang Huang and Patricia Veronica Schoenlein
    Citation: Breast Cancer Research 2012 14:R52
  37. A gene expression signature indicative of activated wound responses is common to more than 90% of non-neoplastic tissues adjacent to breast cancer, but these tissues also exhibit substantial heterogeneity. We ...

    Authors: Erick Román-Pérez, Patricia Casbas-Hernández, Jason R Pirone, Jessica Rein, Lisa A Carey, Ronald A Lubet, Sendurai A Mani, Keith D Amos and Melissa A Troester
    Citation: Breast Cancer Research 2012 14:R51
  38. Acquisition of mesenchymal characteristics confers to breast cancer (BC) cells the capability of invading tissues different from primary tumor site, allowing cell migration and metastasis. Regulators of the me...

    Authors: Laura Abalsamo, Francesca Spadaro, Giuseppina Bozzuto, Luisa Paris, Serena Cecchetti, Luana Lugini, Egidio Iorio, Agnese Molinari, Carlo Ramoni and Franca Podo
    Citation: Breast Cancer Research 2012 14:R50
  39. With the improvement of therapeutic options for the treatment of breast cancer, the development of brain metastases has become a major limitation to life expectancy in many patients. Therefore, our aim was to ...

    Authors: Harriet Wikman, Katrin Lamszus, Niclas Detels, Liubov Uslar, Michaela Wrage, Christian Benner, Ina Hohensee, Bauke Ylstra, Kathrin Eylmann, Marc Zapatka, Guido Sauter, Dirk Kemming, Markus Glatzel, Volkmar Müller, Manfred Westphal and Klaus Pantel
    Citation: Breast Cancer Research 2012 14:R49
  40. For many years, it was assumed that gene fusions were a type of mutation confined largely to leukemias and sarcomas. However, fusion genes are now known to be important in several epithelial cancers and a numb...

    Authors: Paul AW Edwards and Karen D Howarth
    Citation: Breast Cancer Research 2012 14:303
  41. Tumor infiltrating lymphocytes may indicate an immune response to cancer development, but their significance remains controversial in breast cancer. We conducted this study to assess CD8+ (cytotoxic T) lymphoc...

    Authors: Shuzhen Liu, Jonathan Lachapelle, Samuel Leung, Dongxia Gao, William D Foulkes and Torsten O Nielsen
    Citation: Breast Cancer Research 2012 14:R48
  42. Mutations affecting p53 or its upstream activator Chk2 are associated with resistance to DNA-damaging chemotherapy in breast cancer. ATM (Ataxia Telangiectasia Mutated protein) is the key activator of p53 and ...

    Authors: Stian Knappskog, Ranjan Chrisanthar, Erik Løkkevik, Gun Anker, Bjørn Østenstad, Steinar Lundgren, Terje Risberg, Ingvil Mjaaland, Beryl Leirvaag, Hrvoje Miletic and Per E Lønning
    Citation: Breast Cancer Research 2012 14:R47
  43. Estrogen receptor-α (ER) and human epidermal growth factor receptor 2 (HER2) positivity are inversely correlated by standard criteria. However, we investigated the quantitative relation between ER and HER2 exp...

    Authors: Isabel Pinhel, Margaret Hills, Suzanne Drury, Janine Salter, Georges Sumo, Roger A'Hern, Judith M Bliss, Ivana Sestak, Jack Cuzick, Peter Barrett-Lee, Adrian Harris and Mitch Dowsett
    Citation: Breast Cancer Research 2012 14:R46

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