Skip to main content

Table 4 The list of novel variants discovered in the cohort

From: Prevalence of BRCA1, BRCA2, and PALB2 genomic alterations among 924 Taiwanese breast cancer assays with tumor-only targeted sequencing: extended data analysis from the VGH-TAYLOR study

 

Gene

Site

Location

Transcript

Coding

Allele Frequency

ClinVAR

Oncomine

OncoKBâ„¢

1

BRCA1

splicesite

chr17:41215349

NM_007300.3

c.5256+1G > A

12.53%

Pathogenic

Not recorded

No reference

2

BRCA1

splicesite

chr17:41215890

NM_007300.3

c.5215+1G > A

6.12%

Pathogenic

Hotspot

No reference

3

BRCA2

splicesite

chr13:32890556

NM_000059.3

c.-38-3CAG > C

51.19%

Likely pathogenic

Not recorded

No reference