Table 1 Candidate genes identified and corresponding breast cancer risk single-nucleotide polymorphisms

rs7726159

TERT

–

rs2016394

–

DLX2

rs10069690

TERT

–

rs1550623

CDCA7

–

rs2736108

TERT

–

rs6762644

–

SETMAR; ITPR1

rs2588809

RAD51B

–

rs12493607

TGFBR2

–

rs999737

RAD51B

–

rs9790517

TET2

–

rs10759243

–

RAD23B

rs6828523

ADAM29

–

rs2981579

FGFR2

–

rs1353747

PDE4D

–

rs11199914

–

FGFR2

rs1432679

EBF1

–

rs7072776

DNAJC1

–

rs204247

RANBP9

–

rs11814448

DNAJC1

–

rs720475

–

TPK1

rs13387042

–

TNP1

rs6472903

–

HNF4G

rs11552449

–

DCLRE1B

rs2943559

HNF4G

–

rs1045485

CASP8

–

rs7904519

TCF7L2

–

rs4973768

SLC4A7

–

rs3903072

–

KAT5; SNX32; MUS81

rs889312

MAP3K1

–

rs11820646

–

NFRKB

rs12662670

ESR1

–

rs2236007

PAX9

–

rs2046210

ESR1

–

rs941764

CCDC88C

–

rs1011970

CDKN2A; CDKN2B

–

rs17817449

FTO

–

rs704010

ZMIZ1

–

rs13329835

CDYL2

–

rs3817198

LSP1

–

rs527616

–

CHST9

rs10771399

PTHLH

–

rs1436904

CHST9

–

rs3803662

TOX3

–

rs4808801

ELL

–

rs6504950

COX11

–

rs3760982

–

XRCC1; KCNN4; ZNF283; ZNF226

rs8170

–

USHBP1; BABAM1; UNC13A

rs132390

–

EMID1; NF2

rs2363956

–

USHBP1; BABAM1; UNC13A

rs6001930

MKL1

–

rs2823093

NRIP1

–

rs4245739

MDM4

–

rs616488

PEX14

–

rs6678914

LGR6

–

rs4849887

–

EPB41L5

rs11075995

FTO

–