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Figure 1 | Breast Cancer Research

Figure 1

From: Establishment of the epithelial-specific transcriptome of normal and malignant human breast cells based on MPSS and array expression data

Figure 1

Comparison of massively parallel signature sequencing (MPSS) data with microarray analysis. Differentially expressed gene profiles from MPSS (100%) were overlaid with each microarray platform individually. (a) Percentage of coverage (light grey) and concordance in differential expression between MPSS and individual arrays (dark grey) are shown together with the combined coverage and confirmation by at least one array (1 platform). (b) Enumeration of the differentially expressed transcripts detected by "MPSS-only", by "MPSS and array", and those transcripts reported as differential by at least two arrays, but not by MPSS ("Array only"). The results obtained by RT-PCR for these subgroups are shown below (see Additional file 6).

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Breast Cancer Research

ISSN: 1465-542X

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