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Box 1 Glossary of terms

From: High-throughput genomic technology in research and clinical management of breast cancer. Evolving landscape of genetic epidemiological studies

Genetic epidemiology

The study of the relationship between variation in specific genes and disease risk

Genomic epidemiology

The study of the relationship between variation across the entire human genome and disease risk

Haplotype

A set of closely linked alleles that tend to be inherited together

HapMap project

A multi-country effort to identify and catalog common genetic variants in humans and work out their haplotype structures

Linkage disequilibrium

The phenomenon that alleles physically close to each other tend to be correlated and are co-inherited as a block of DNA segment

Microsatellite

A type of DNA sequence variation where there is tandem repetition of a short DNA sequence (usually two to four nucleotides)

Penetrance

Probability that a deleterious gene variant will actually result in disease

Polymorphism

Variation in DNA sequence among individuals

Single nucleotide polymorphism

A type of DNA sequence variation in which a single nucleotide (A, T, C, or G) in the genome sequence is altered