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Table 2 DEGs enriched in metabolic pathways

From: Metabolomics assisted by transcriptomics analysis to reveal metabolic characteristics and potential biomarkers associated with treatment response of neoadjuvant therapy with TCbHP regimen in HER2 + breast cancer

Classification_level2

Classification_level1

gene_number

percentage

Genes

Amino acid metabolism

Metabolism

2

2.82

ADH1C↑; CKMT1A↓

Carbohydrate metabolism

Metabolism

4

5.63

ADH1C↑; ENPP3↓; MTMR4↓; RENBP↑

Glycan biosynthesis and metabolism

Metabolism

2

2.82

IDUA↑; MAN2A1↓

Lipid metabolism

Metabolism

4

5.63

ADH1C↑; SGPP2↓; TAZ↑; TMEM86B↑

Metabolism of cofactors and vitamins

Metabolism

2

2.82

ADH1C↑; ENPP3↓

Metabolism of other amino acids

Metabolism

2

2.82

GSTM1↑; GSTM5↑

Nucleotide metabolism

Metabolism

1

1.41

ENPP3↓

Xenobiotics biodegradation and metabolism

Metabolism

4

5.63

ADH1C↑; GSTM1↑; GSTM5↑; MPO↓