Integration of multiomics data shows down regulation of mismatch repair and tubulin pathways in triple-negative chemotherapy-resistant breast tumors

Table 3 Publicly available TNBC gene expression datasets that are included in this analysis for the 17-gene signature validation

TNBC	Study name	Total	LAR	Non-LAR	non-LAR			DE	Platform	References
TNBC	Study name	Total	LAR	Non-LAR	Non-pCR	pCR	Missing	DE	Platform	References
Tumor only	GSE106977	119	22	97	54	43	–	RD:pCR	Microarray	[39]
	GSE25065	60	11	49	27	18	4	RD:pCR	Microarray	[42]
	GSE25505	116	22	94	59	34	1	RD:pCR	Microarray	[55]
	GSE32646	26	6	20	12	8	–	RD:pCR	Microarray	[41]
Paired Tumor Normal	TCGA	11*	2*	9*	–	–	–	Tumor:Normal	RNA-Seq	[37]

ISSN: 1465-542X