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Table 3 List of Top 20 differential expression of immune transcripts in 1E4 versus autochthonous model

From: Comparing syngeneic and autochthonous models of breast cancer to identify tumor immune components that correlate with response to immunotherapy in breast cancer

Transcript

Gene Sets

Probe ID

Log2 fold change

P-value

Glycam1-mRNA

Adhesion

NM_008134.2:124

-9.09

1.34E-07

Itgb4-mRNA

Adhesion, CD molecules

NM_001005608.2:3355

1.73

2.23E-07

Birc5-mRNA

Apoptosis, Cell Cycle, Cytokines & Receptors

NM_009689.2:237

1.43

2.83E-07

Saa1-mRNA

Adhesion, Cytokines & Receptors, Innate, Macrophage Functions

NM_009117.3:351

-3.13

5.19E-07

Il6ra-mRNA

CD molecules, Chemokines & Receptors, Cytokines & Receptors, Interleukins

NM_010559.2:2825

-1.61

5.86E-07

Hif1a-mRNA

Apoptosis, Cancer Progression

NM_010431.2:1294

0.53

1.12E-06

Tnfrsf10b-mRNA

Apoptosis, CD molecules, TNF Superfamily

NM_020275.3:1625

0.93

1.40E-06

C4b-mRNA

Complement Pathway, Humoral, Inflammation, Innate

NM_009780.2:491

-2.51

6.68E-06

Il1rap-mRNA

Cytokines & Receptors, Inflammation, Innate, Interleukins

NM_008364.2:2415

0.84

7.95E-06

Cd200-mRNA

CD molecules

NM_010818.3:686

1.19

8.63E-06

Casp1-mRNA

Cytokines & Receptors, Innate, Interleukins, Microglial Functions

NM_009807.2:259

1.13

1.76E-05

Gpi1-mRNA

Apoptosis, Cytokines & Receptors, Humoral

NM_008155.4:1540

0.53

2.43E-05

Mif-mRNA

B-Cell Functions, Cytokines & Receptors, Inflammation, Innate, Transporter Functions

NM_010798.2:373

0.62

2.84E-05

Vegfa-mRNA

Apoptosis, Cytokines & Receptors, Macrophage Functions, T-Cell Functions

NM_001025250.3:3015

1.78

2.85E-05

Kit-mRNA

CD molecules, Cytokines & Receptors

NM_001122733.1:4275

1.06

3.52E-05

Tank-mRNA

Basic Cell Functions, Innate

NM_011529.1:491

0.35

4.55E-05

Lcp1-mRNA

T-Cell Functions, Transporter Functions

NM_001247984.1:3344

-0.59

5.19E-05

Bax-mRNA

Apoptosis, Transporter Functions

NM_007527.3:735

0.49

6.44E-05

Atm-mRNA

Apoptosis, B-Cell Functions, Cell Cycle, Senescence

NM_007499.2:5543

-0.62

7.50E-05

App-mRNA

Apoptosis, Cell Cycle, Innate, Transporter Functions

NM_007471.2:511

0.64

8.04E-05