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Table 2 QPCR primers for various genes examined in this study

From: Integrin alpha-2 and beta-1 expression increases through multiple generations of the EDW01 patient-derived xenograft model of breast cancer—insight into their role in epithelial mesenchymal transition in vivo gained from an in vitro model system

Oligonucleotide name

Species

Sequence (5′-3′)

5′ Hs L32

Human

CAGGGTTCGTAGAAGATTCAAGGG

3′Hs L32

Human

CTTGGAGGAAACATTGTGAGCGATC

Hs L32 RT

Human

CAGAAAACGTGCACATGAGCTGC

5′ Hs CD24

Human

GACTCAGGCC AAGAAACGTC TTCTAAA

3′ Hs CD24

Human

GTTGCCTCTCCTTCATCTTG TACATGAAA

Hs CD24 RT

Human

GGGCGACAAAGTGAGACTGTCTAAAA

5′ Hs CD44

Human

CACAATGGCCCAGATGGAGAAA

3′ Hs CD44

Human

CTTCGACTGTTGACTGCAATGCAAA

Hs RT CD44

Human

GGCAATGTTGCAAGGGTTTGTGAAGACTT

5′ Hs VIM

Human

CAGGCGATATATTACCCAGGCAAGAA

3′ Hs VIM

Human

CTTGTAGGAGTGTCGGTTGTTAAGAA

Hs VIM RT

Human

CTAAATCTTGTAGGAGTGTCGGTTGTT

5′ Hs CDH1

Human

GGCACAGATGGTGTGATTACAGTCAAAA

3′ Hs CDH1

Human

GTCCCAGGCGTAGACCAAGAAA

Hs CDH1 RT

Human

CTCTGTCTTTGGCTGCAGCACTTTA

5′ Hs ILK

Human

GATGCAGGACAAGTAGGACTGGAA

3′ Hs ILK

Human

CAACCAGAGGCCTGCTGCTTT

Hs ILK RT

Human

GCTGGGGTAGTACCATGACTG

5′ Hs TWIST1

Human

CTAGAGACTCTGGAGCTGGATAACTAAAAA

3′ Hs TWIST1

Human

CGACCTCTTGAGAATGCATGCATGAAAAA

Hs TWIST1 RT

Human

GAGAAAGTCCATAGTGATGCCTTTCCTTT

5′ Hs SNAI1

Human

CCAGACCCACTCAGATGTCAAGAA

3′ Hs SNAI1

Human

GGCAGAGGACACAGAACCAGAAAA

Hs SNAI1 RT

Human

CGCAGACAGGCCAGCTCAGGAAT

5′ Hs SNAI2

Human

CCCAATGGCCTCTCTCCTCTTT

3′ Hs SNAI2

Human

CATCGCAGTGCAGCTGCTTATGTTT

Hs SNAI2 RT

Human

CATCGCAGTGCAGCTGCTTATGTTT

5′ Hs ZEB1

Human

GTTACCAGGGAGGAGCAGTGAAA

3′ Hs ZEB1

Human

GACAGCAGTGTCTTGTTGTTGTAGAAA

Hs ZEB1 RT

Human

GACAGCAGTGTCTTGTTGTTGTAGAAA

5′ Hs ZEB2

Human

CCACCTGGAACTCCAGATGCTTTT

3′ Hs ZEB2

Human

GCCTTGCCACACTCTGTGCATTT

Hs ZEB2 RT

Human

GCCTTGCCACACTCTGTGCATTT

5′ Hs ITGA2

Human

GACCTATCCACTGCCACATGTGAAAAA

3′ Hs ITGA2

Human

CCACAGAGGACCACATGTGAGAAAA

Hs ITGA2 RT

Human

GTCAGAACACACACCCGTTGTGTAATA

5′ Hs ITGB1

Human

GACTGATCAGTTCAGTTTGCTGTGTGTTT

3′ Hs ITGB1

Human

CCCTGCTTGTATACATTCTCCACATGATTT

Hs ITGB1 RT

 

CCCTGCTTGTATACATTCTCCACATGATTT

5′ Ms. ITGB1

Mouse

GCGTGTGCAGGTGTCGTGTTT

3′ Ms. ITGB1

Mouse

GAAGGCTCTGCACTGAACACATTCTTT

Ms ITGB1 RT

Mouse

GAAGGCTCTGCACTGAACACATTCTTT