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Table 2 Frequency of nonsynonymous TP53 mutations by tumor subtypes in the Hong Kong breast cancer study (HKBC) and TCGA white population

From: Immune gene expression profiling reveals heterogeneity in luminal breast tumors

 

Low-TIL, N (%)

High-ISG, N (%)

High-TIL, N (%)

HER2+basal, N (%)

HKBC

WT

29 (100.0%)

11 (57.9%)

11 (100.0%)

10 (45.5%)

MUT

0 (0%)

8 (42.1%)

0 (0%)

12 (54.5%)

P value*

Ref

0.0002

–

< 0.0001

TCGA White

WT

169 (95.5%)

142 (87.1%)

83 (91.2%)

105 (50.7%)

MUT

8 (4.5%)

21 (12.9%)

8 (8.8%)

102 (49.3%)

P value*

Ref

0.01

0.18

< 0.0001

  1. *P values were obtained from Fisher’s exact test by comparing each immune subtype with low-TIL