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Table 2 Differentially expressed genes identified in both AGNES and PAM signatures

From: Gene expression signature of atypical breast hyperplasia and regulation by SFRP1

AFFYMETRIX_EXON_ID

Gene name

7903414

Amylase, alpha 1A (salivary) (AMY1A)

7927058

Unknown

7951133

Mastermind-like transcriptional coactivator 2 (MAML2)

7954208

Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma (PIK3C2G)

7963427

Keratin 5 (KRT5)

7976726

Enah/Vasp-like (EVL)

7977621

NDRG family member 2 (NDRG2)

7978706

Forkhead box A1 (FOXA1)

7989501

Carbonic anhydrase 12 (CA12)

7996027

C-X3-C motif chemokine ligand 1 (CX3CL1)

8015337

Keratin 15 (KRT15)

8022927

Solute carrier family 39 member 6 (SLC39A6)

8024909

Lysine demethylase 4B (KDM4B)

8041644

Pleckstrin homology, MyTH4 and FERM domain containing H2 (PLEKHH2)

8075182

X-box binding protein 1 (XBP1)

8086607

Lactotransferrin (LTF)

8094441

Solute carrier family 34 member 2 (SLC34A2)

8095110

KIT proto-oncogene receptor tyrosine kinase (KIT)

8100994

C-X-C motif chemokine ligand 2 (CXCL2)

8106098

Microtubule-associated protein 1B (MAP1B)

8108873

Rho GTPase activating protein 26 (ARHGAP26)

8109926

Gamma-aminobutyric acid type A receptor pi subunit (GABRP)

8111932

C-C motif chemokine ligand 28 (CCL28)

8113073

Arrestin domain containing 3 (ARRDC3)

8117120

Inhibitor of DNA binding 4, HLH protein (ID4)

8119076

Unknown

8121861

Nuclear receptor coactivator 7 (NCOA7)

8124144

DEK proto-oncogene (DEK)

8127234

Dystonin (DST)

8130556

Uncharacterized LOC100129518 (LOC100129518)

8136347

Caldesmon 1 (CALD1)

8145291

Solute carrier family 25 member 37 (SLC25A37)

8150076

Dual specificity phosphatase 4 (DUSP4)

8150428

Secreted frizzled-related protein 1 (SFRP1)

8152119

Neurocalcin delta (NCALD)

8155359

Contactin-associated protein-like 3B (CNTNAP3B)

8155460

Contactin-associated protein-like 3 pseudogene 2 (CNTNAP3P2)

8155540

Contactin-associated protein-like 3B (CNTNAP3B)

8161460

Contactin-associated protein-like 3B (CNTNAP3B)

8166447

Patched domain containing 1 (PTCHD1)

8168727

Unknown

8171297

Midline 1 (MID1)

8171921

Dystrophin (DMD)