TY - JOUR AU - Snell, C. AU - Krypuy, M. AU - Wong, E. M. AU - Loughrey, M. B. AU - Dobrovic, A. PY - 2008 DA - 2008// TI - BRCA1 promoter methylation in peripheral blood DNA of mutation negative familial breast cancer patients with a BRCA1 tumour phenotype JO - Breast Cancer Res VL - 10 UR - https://doi.org/10.1186/bcr1858 DO - 10.1186/bcr1858 ID - Snell2008 ER - TY - JOUR AU - Wong, E. M. AU - Southey, M. C. AU - Fox, S. B. AU - Brown, M. A. AU - Dowty, J. G. AU - Jenkins, M. A. AU - Giles, G. G. AU - Hopper, J. L. AU - Dobrovic, A. PY - 2011 DA - 2011// TI - Constitutional methylation of the BRCA1 promoter is specifically associated with BRCA1 mutation-associated pathology in early-onset breast Cancer JO - Cancer Prev Res VL - 4 UR - https://doi.org/10.1158/1940-6207.CAPR-10-0212 DO - 10.1158/1940-6207.CAPR-10-0212 ID - Wong2011 ER - TY - JOUR AU - Iwamoto, T. AU - Yamamoto, N. AU - Taguchi, T. AU - Tamaki, Y. AU - Noguchi, S. PY - 2011 DA - 2011// TI - BRCA1 promoter methylation in peripheral blood cells is associated with increased risk of breast cancer with BRCA1 promoter methylation JO - Breast Cancer Res Treat VL - 129 UR - https://doi.org/10.1007/s10549-010-1188-1 DO - 10.1007/s10549-010-1188-1 ID - Iwamoto2011 ER - TY - JOUR AU - Brennan, K. AU - Garcia-Closas, M. AU - Orr, N. AU - Fletcher, O. AU - Jones, M. AU - Ashworth, A. AU - Swerdlow, A. AU - Thorne, H. AU - Riboli, E. AU - Vineis, P. PY - 2012 DA - 2012// TI - Intragenic ATM methylation in peripheral blood DNA as a biomarker of breast Cancer risk JO - Cancer Res VL - 72 UR - https://doi.org/10.1158/0008-5472.CAN-11-3157 DO - 10.1158/0008-5472.CAN-11-3157 ID - Brennan2012 ER - TY - JOUR AU - Ulrich, C. M. AU - Toriola, A. T. AU - Koepl, L. M. AU - Sandifer, T. AU - Poole, E. M. AU - Duggan, C. AU - McTiernan, A. AU - Issa, J. -. P. J. PY - 2012 DA - 2012// TI - Metabolic, hormonal and immunological associations with global DNA methylation among postmenopausal women JO - Epigenetics VL - 7 UR - https://doi.org/10.4161/epi.21464 DO - 10.4161/epi.21464 ID - Ulrich2012 ER - TY - JOUR AU - Shenker, N. S. AU - Flower, K. J. AU - Wilhelm-Benartzi, C. S. AU - Dai, W. AU - Bell, E. AU - Gore, E. AU - Bahrawy, M. AU - Weaver, G. AU - Brown, R. AU - Flanagan, J. M. PY - 2015 DA - 2015// TI - Transcriptional implications of intragenic DNA methylation in the oestrogen receptor alpha gene in breast cancer cells and tissues JO - BMC Cancer VL - 15 UR - https://doi.org/10.1186/s12885-015-1335-5 DO - 10.1186/s12885-015-1335-5 ID - Shenker2015 ER - TY - JOUR AU - Liu, C. AU - Marioni, R. E. AU - Hedman, A. K. AU - Pfeiffer, L. AU - Tsai, P. C. AU - Reynolds, L. M. AU - Just, A. C. AU - Duan, Q. AU - Boer, C. G. AU - Tanaka, T. PY - 2016 DA - 2016// TI - A DNA methylation biomarker of alcohol consumption JO - Mol Psychiatry VL - 23 UR - https://doi.org/10.1038/mp.2016.192 DO - 10.1038/mp.2016.192 ID - Liu2016 ER - TY - JOUR AU - Wahl, S. AU - Drong, A. AU - Lehne, B. AU - Loh, M. AU - Scott, W. R. AU - Kunze, S. AU - Tsai, P. C. AU - Ried, J. S. AU - Zhang, W. AU - Yang, Y. PY - 2017 DA - 2017// TI - Epigenome-wide association study of body mass index, and the adverse outcomes of adiposity JO - Nature VL - 541 UR - https://doi.org/10.1038/nature20784 DO - 10.1038/nature20784 ID - Wahl2017 ER - TY - JOUR AU - Brennan, K. AU - Flanagan, J. M. PY - 2012 DA - 2012// TI - Is there a link between genome-wide hypomethylation in blood and cancer risk? JO - Cancer Prev Res (Phila) VL - 5 UR - https://doi.org/10.1158/1940-6207.CAPR-12-0316 DO - 10.1158/1940-6207.CAPR-12-0316 ID - Brennan2012 ER - TY - JOUR AU - Baglietto, L. AU - Ponzi, E. AU - Haycock, P. AU - Hodge, A. AU - Bianca Assumma, M. AU - Jung, C. H. AU - Chung, J. AU - Fasanelli, F. AU - Guida, F. AU - Campanella, G. PY - 2017 DA - 2017// TI - DNA methylation changes measured in pre-diagnostic peripheral blood samples are associated with smoking and lung cancer risk JO - Int J Cancer VL - 140 UR - https://doi.org/10.1002/ijc.30431 DO - 10.1002/ijc.30431 ID - Baglietto2017 ER - TY - JOUR AU - Shenker, N. S. AU - Ueland, P. M. AU - Polidoro, S. AU - Veldhoven, K. AU - Ricceri, F. AU - Brown, R. AU - Flanagan, J. M. AU - Vineis, P. PY - 2013 DA - 2013// TI - DNA methylation as a Long-term biomarker of exposure to tobacco smoke JO - Epidemiology VL - 24 UR - https://doi.org/10.1097/EDE.0b013e31829d5cb3 DO - 10.1097/EDE.0b013e31829d5cb3 ID - Shenker2013 ER - TY - JOUR AU - Miousse, I. R. AU - Kutanzi, K. R. AU - Koturbash, I. PY - 2017 DA - 2017// TI - Effects of ionizing radiation on DNA methylation: from experimental biology to clinical applications JO - Int J Radiat Biol VL - 93 UR - https://doi.org/10.1080/09553002.2017.1287454 DO - 10.1080/09553002.2017.1287454 ID - Miousse2017 ER - TY - JOUR AU - Johansson, A. AU - Flanagan, J. M. PY - 2017 DA - 2017// TI - Epigenome-wide association studies for breast cancer risk and risk factors JO - Trends Cancer Res VL - 12 ID - Johansson2017 ER - TY - JOUR AU - Tang, Q. AU - Cheng, J. AU - Cao, X. AU - Surowy, H. AU - Burwinkel, B. PY - 2016 DA - 2016// TI - Blood-based DNA methylation as biomarker for breast cancer: a systematic review JO - Clin Epigenetics VL - 8 UR - https://doi.org/10.1186/s13148-016-0282-6 DO - 10.1186/s13148-016-0282-6 ID - Tang2016 ER - TY - JOUR AU - Flanagan, J. M. AU - Munoz-Alegre, M. AU - Henderson, S. AU - Tang, T. AU - Sun, P. AU - Johnson, N. AU - Fletcher, O. AU - Santos, S. I. AU - Peto, J. AU - Boshoff, C. PY - 2009 DA - 2009// TI - Gene-body hypermethylation of ATM in peripheral blood DNA of bilateral breast cancer patients JO - Hum Mol Genet VL - 18 UR - https://doi.org/10.1093/hmg/ddp033 DO - 10.1093/hmg/ddp033 ID - Flanagan2009 ER - TY - JOUR AU - Iwamoto, T. AU - Yamamoto, N. AU - Taguchi, T. AU - Tamaki, Y. AU - Noguchi, S. PY - 2010 DA - 2010// TI - BRCA1 promoter methylation in peripheral blood cells is associated with increased risk of breast cancer with BRCA1 promoter methylation JO - Breast Cancer Res Treat VL - 129 UR - https://doi.org/10.1007/s10549-010-1188-1 DO - 10.1007/s10549-010-1188-1 ID - Iwamoto2010 ER - TY - JOUR AU - Cho, Y. H. AU - Yazici, H. AU - Wu, H. C. AU - Terry, M. B. AU - Gonzalez, K. AU - Qu, M. AU - Dalay, N. AU - Santella, R. M. PY - 2010 DA - 2010// TI - Aberrant promoter hypermethylation and genomic hypomethylation in tumor, adjacent normal tissues and blood from breast cancer patients JO - Anticancer Res VL - 30 ID - Cho2010 ER - TY - JOUR AU - Bosviel, R. AU - Garcia, S. AU - Lavediaux, G. AU - Michard, E. AU - Dravers, M. AU - Kwiatkowski, F. AU - Bignon, Y. -. J. AU - Bernard-Gallon, D. J. PY - 2012 DA - 2012// TI - BRCA1 promoter methylation in peripheral blood DNA was identified in sporadic breast cancer and controls JO - Cancer Epidemiol VL - 36 UR - https://doi.org/10.1016/j.canep.2012.02.001 DO - 10.1016/j.canep.2012.02.001 ID - Bosviel2012 ER - TY - JOUR AU - Zhang, L. AU - Long, X. PY - 2015 DA - 2015// TI - Association of BRCA1 promoter methylation with sporadic breast cancers: evidence from 40 studies JO - Sci Rep VL - 5 UR - https://doi.org/10.1038/srep17869 DO - 10.1038/srep17869 ID - Zhang2015 ER - TY - JOUR AU - Gupta, S. AU - Jaworska-Bieniek, K. AU - Narod, S. A. AU - Lubinski, J. AU - Wojdacz, T. K. AU - Jakubowska, A. PY - 2014 DA - 2014// TI - Methylation of the BRCA1 promoter in peripheral blood DNA is associated with triple-negative and medullary breast cancer JO - Breast Cancer Res Treat VL - 148 UR - https://doi.org/10.1007/s10549-014-3179-0 DO - 10.1007/s10549-014-3179-0 ID - Gupta2014 ER - TY - JOUR AU - Cho, Y. H. AU - McCullough, L. E. AU - Gammon, M. D. AU - Wu, H. C. AU - Zhang, Y. J. AU - Wang, Q. AU - Xu, X. AU - Teitelbaum, S. L. AU - Neugut, A. I. AU - Chen, J. PY - 2015 DA - 2015// TI - Promoter Hypermethylation in white blood cell DNA and breast Cancer risk JO - J Cancer VL - 6 UR - https://doi.org/10.7150/jca.12174 DO - 10.7150/jca.12174 ID - Cho2015 ER - TY - JOUR AU - Tang, Q. AU - Holland-Letz, T. AU - Slynko, A. AU - Cuk, K. AU - Marme, F. AU - Schott, S. AU - Heil, J. AU - Qu, B. AU - Golatta, M. AU - Bewerunge-Hudler, M. PY - 2016 DA - 2016// TI - DNA methylation array analysis identifies breast cancer associated RPTOR, MGRN1 and RAPSN hypomethylation in peripheral blood DNA JO - Oncotarget VL - 7 UR - https://doi.org/10.18632/oncotarget.11640 DO - 10.18632/oncotarget.11640 ID - Tang2016 ER - TY - JOUR AU - Severi, G. AU - Southey, M. C. AU - English, D. R. PY - 2014 DA - 2014// TI - Jung C-h, Lonie a, McLean C, Tsimiklis H, Hopper JL, Giles GG, Baglietto L: epigenome-wide methylation in DNA from peripheral blood as a marker of risk for breast cancer JO - Breast Cancer Res Treat VL - 148 UR - https://doi.org/10.1007/s10549-014-3209-y DO - 10.1007/s10549-014-3209-y ID - Severi2014 ER - TY - JOUR AU - Dugué, P. -. A. AU - Milne, R. L. AU - Southey, M. C. PY - 2017 DA - 2017// TI - A prospective study of peripheral blood DNA methylation at RPTOR, MGRN1 and RAPSN and risk of breast cancer JO - Breast Cancer Res Treat VL - 161 UR - https://doi.org/10.1007/s10549-016-4032-4 DO - 10.1007/s10549-016-4032-4 ID - Dugué2017 ER - TY - JOUR AU - Joo, J. E. AU - Dowty, J. G. AU - Milne, R. L. AU - Wong, E. M. AU - Dugue, P. A. AU - English, D. AU - Hopper, J. L. AU - Goldgar, D. E. AU - Giles, G. G. AU - Southey, M. C. PY - 2018 DA - 2018// TI - Heritable DNA methylation marks associated with susceptibility to breast cancer JO - Nat Commun VL - 9 UR - https://doi.org/10.1038/s41467-018-03058-6 DO - 10.1038/s41467-018-03058-6 ID - Joo2018 ER - TY - JOUR AU - Xu, Z. AU - Bolick, S. C. E. AU - DeRoo, L. A. AU - Weinberg, C. R. AU - Sandler, D. P. AU - Taylor, J. A. PY - 2013 DA - 2013// TI - Epigenome-wide association study of breast Cancer using prospectively collected sister study samples JO - J Natl Cancer Inst VL - 105 UR - https://doi.org/10.1093/jnci/djt045 DO - 10.1093/jnci/djt045 ID - Xu2013 ER - TY - JOUR AU - Vryer, R. AU - Saffery, R. PY - 2017 DA - 2017// TI - What’s in a name? Context-dependent significance of ‘global’ methylation measures in human health and disease JO - Clin Epigenetics VL - 9 UR - https://doi.org/10.1186/s13148-017-0311-0 DO - 10.1186/s13148-017-0311-0 ID - Vryer2017 ER - TY - JOUR AU - Jones, P. A. AU - Gonzalgo, M. L. PY - 1997 DA - 1997// TI - Altered DNA methylation and genome instability: a new pathway to cancer? JO - Proc Natl Acad Sci VL - 94 UR - https://doi.org/10.1073/pnas.94.6.2103 DO - 10.1073/pnas.94.6.2103 ID - Jones1997 ER - TY - JOUR AU - Sturgeon, S. R. AU - Pilsner, J. R. AU - Arcaro, K. F. AU - Ikuma, K. AU - Wu, H. AU - Kim, S. M. AU - Chopra-Tandon, N. AU - Karpf, A. R. AU - Ziegler, R. G. AU - Schairer, C. PY - 2017 DA - 2017// TI - White blood cell DNA methylation and risk of breast cancer in the prostate, lung, colorectal, and ovarian Cancer screening trial (PLCO) JO - Breast cancer research : BCR VL - 19 UR - https://doi.org/10.1186/s13058-017-0886-6 DO - 10.1186/s13058-017-0886-6 ID - Sturgeon2017 ER - TY - JOUR AU - Veldhoven, K. AU - Polidoro, S. AU - Baglietto, L. AU - Severi, G. AU - Sacerdote, C. AU - Panico, S. AU - Mattiello, A. AU - Palli, D. AU - Masala, G. AU - Krogh, V. PY - 2015 DA - 2015// TI - Epigenome-wide association study reveals decreased average methylation levels years before breast cancer diagnosis JO - Clin Epigenetics VL - 7 UR - https://doi.org/10.1186/s13148-015-0104-2 DO - 10.1186/s13148-015-0104-2 ID - Veldhoven2015 ER - TY - JOUR AU - Ambatipudi, S. AU - Horvath, S. AU - Perrier, F. AU - Cuenin, C. AU - Hernandez-Vargas, H. AU - Calvez-Kelm, F. AU - Durand, G. AU - Byrnes, G. AU - Ferrari, P. AU - Bouaoun, L. PY - 2017 DA - 2017// TI - DNA methylome analysis identifies accelerated epigenetic ageing associated with postmenopausal breast cancer susceptibility JO - Eur J Cancer VL - 75 UR - https://doi.org/10.1016/j.ejca.2017.01.014 DO - 10.1016/j.ejca.2017.01.014 ID - Ambatipudi2017 ER - TY - JOUR AU - Prorok, P. C. AU - Andriole, G. L. AU - Bresalier, R. S. AU - Buys, S. S. AU - Chia, D. AU - Crawford, E. D. AU - Fogel, R. AU - Gelmann, E. P. AU - Gilbert, F. AU - Hasson, M. A. PY - 2000 DA - 2000// TI - Design of the Prostate, lung, colorectal and ovarian (PLCO) Cancer screening trial JO - Control Clin Trials VL - 21 UR - https://doi.org/10.1016/S0197-2456(00)00098-2 DO - 10.1016/S0197-2456(00)00098-2 ID - Prorok2000 ER - TY - JOUR AU - Moran, S. AU - Arribas, C. AU - Esteller, M. PY - 2016 DA - 2016// TI - Validation of a DNA methylation microarray for 850,000 CpG sites of the human genome enriched in enhancer sequences JO - Epigenomics VL - 8 UR - https://doi.org/10.2217/epi.15.114 DO - 10.2217/epi.15.114 ID - Moran2016 ER - TY - JOUR AU - Aryee, M. J. AU - Jaffe, A. E. AU - Corrada-Bravo, H. AU - Ladd-Acosta, C. AU - Feinberg, A. P. AU - Hansen, K. D. AU - Irizarry, R. A. PY - 2014 DA - 2014// TI - Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays JO - Bioinformatics VL - 30 UR - https://doi.org/10.1093/bioinformatics/btu049 DO - 10.1093/bioinformatics/btu049 ID - Aryee2014 ER - TY - JOUR AU - Maksimovic, J. AU - Gordon, L. AU - Oshlack, A. PY - 2012 DA - 2012// TI - SWAN: subset-quantile within Array normalization for Illumina Infinium HumanMethylation450 BeadChips JO - Genome Biol VL - 13 UR - https://doi.org/10.1186/gb-2012-13-6-r44 DO - 10.1186/gb-2012-13-6-r44 ID - Maksimovic2012 ER - TY - JOUR AU - Pidsley, R. AU - Zotenko, E. AU - Peters, T. J. AU - Lawrence, M. G. AU - Risbridger, G. P. AU - Molloy, P. AU - Djik, S. AU - Muhlhausler, B. AU - Stirzaker, C. AU - Clark, S. J. PY - 2016 DA - 2016// TI - Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling JO - Genome Biol VL - 17 UR - https://doi.org/10.1186/s13059-016-1066-1 DO - 10.1186/s13059-016-1066-1 ID - Pidsley2016 ER - TY - JOUR AU - Chen, Y. A. AU - Lemire, M. AU - Choufani, S. AU - Butcher, D. T. AU - Grafodatskaya, D. AU - Zanke, B. W. AU - Gallinger, S. AU - Hudson, T. J. AU - Weksberg, R. PY - 2013 DA - 2013// TI - Discovery of cross-reactive probes and polymorphic CpGs in the Illumina Infinium HumanMethylation450 microarray JO - Epigenetics VL - 8 UR - https://doi.org/10.4161/epi.23470 DO - 10.4161/epi.23470 ID - Chen2013 ER - TY - JOUR AU - Houseman, E. A. AU - Accomando, W. P. AU - Koestler, D. C. AU - Christensen, B. C. AU - Marsit, C. J. AU - Nelson, H. H. AU - Wiencke, J. K. AU - Kelsey, K. T. PY - 2012 DA - 2012// TI - DNA methylation arrays as surrogate measures of cell mixture distribution JO - BMC Bioinformatics VL - 13 UR - https://doi.org/10.1186/1471-2105-13-86 DO - 10.1186/1471-2105-13-86 ID - Houseman2012 ER - TY - JOUR AU - Leek, J. T. AU - Storey, J. D. PY - 2007 DA - 2007// TI - Capturing heterogeneity in gene expression studies by surrogate variable analysis JO - PLoS Genet VL - 3 UR - https://doi.org/10.1371/journal.pgen.0030161 DO - 10.1371/journal.pgen.0030161 ID - Leek2007 ER - TY - JOUR AU - Leek, J. T. AU - Storey, J. D. PY - 2008 DA - 2008// TI - A general framework for multiple testing dependence JO - Proc Natl Acad Sci VL - 105 UR - https://doi.org/10.1073/pnas.0808709105 DO - 10.1073/pnas.0808709105 ID - Leek2008 ER - TY - JOUR AU - Sandoval, J. AU - Heyn, H. AU - Moran, S. AU - Serra-Musach, J. AU - Pujana, M. A. AU - Bibikova, M. AU - Esteller, M. PY - 2011 DA - 2011// TI - Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome JO - Epigenetics VL - 6 UR - https://doi.org/10.4161/epi.6.6.16196 DO - 10.4161/epi.6.6.16196 ID - Sandoval2011 ER - TY - JOUR AU - Kloten, V. AU - Becker, B. AU - Winner, K. AU - Schrauder, M. G. AU - Fasching, P. A. AU - Anzeneder, T. AU - Veeck, J. AU - Hartmann, A. AU - Knüchel, R. AU - Dahl, E. PY - 2013 DA - 2013// TI - Promoter hypermethylation of the tumor-suppressor genes ITIH5, DKK3, and RASSF1A as novel biomarkers for blood-based breast cancer screening JO - Breast Cancer Res VL - 15 UR - https://doi.org/10.1186/bcr3375 DO - 10.1186/bcr3375 ID - Kloten2013 ER - TY - JOUR AU - Yazici, H. AU - Terry, M. B. AU - Cho, Y. H. AU - Senie, R. T. AU - Liao, Y. AU - Andrulis, I. AU - Santella, R. M. PY - 2009 DA - 2009// TI - Aberrant methylation of RASSF1A in plasma DNA before breast Cancer diagnosis in the breast Cancer family registry. Cancer epidemiology biomarkers & JO - Prevention VL - 18 ID - Yazici2009 ER - TY - STD TI - Cao X, Tang Q, Holland-Letz T, Gundert M, Cuk K, Schott S, Heil J, Golatta M, Sohn C, Schneeweiss A, et al. Evaluation of promoter methylation of RASSF1A and ATM in peripheral blood of breast Cancer patients and healthy control individuals. Int J Mol Sci. 2018;19(3). ID - ref44 ER - TY - JOUR AU - Woo, H. D. AU - Kim, J. PY - 2012 DA - 2012// TI - Global DNA Hypomethylation in peripheral blood leukocytes as a biomarker for Cancer risk: a meta-analysis JO - PLoS One VL - 7 UR - https://doi.org/10.1371/journal.pone.0034615 DO - 10.1371/journal.pone.0034615 ID - Woo2012 ER - TY - JOUR AU - FitzGerald, L. M. AU - Naeem, H. AU - Makalic, E. AU - Schmidt, D. F. AU - Dowty, J. G. AU - Joo, J. E. AU - Jung, C. H. AU - Bassett, J. K. AU - Dugue, P. A. AU - Chung, J. PY - 2017 DA - 2017// TI - Genome-wide measures of peripheral blood Dna methylation and prostate Cancer risk in a prospective nested case-control study JO - Prostate VL - 77 UR - https://doi.org/10.1002/pros.23289 DO - 10.1002/pros.23289 ID - FitzGerald2017 ER - TY - JOUR AU - Dugue, P. A. AU - Brinkman, M. T. AU - Milne, R. L. AU - Wong, E. M. AU - FitzGerald, L. M. AU - Bassett, J. K. AU - Joo, J. E. AU - Jung, C. H. AU - Makalic, E. AU - Schmidt, D. F. PY - 2016 DA - 2016// TI - Genome-wide measures of DNA methylation in peripheral blood and the risk of urothelial cell carcinoma: a prospective nested case-control study JO - Br J Cancer VL - 115 UR - https://doi.org/10.1038/bjc.2016.237 DO - 10.1038/bjc.2016.237 ID - Dugue2016 ER - TY - JOUR AU - Stirzaker, C. AU - Taberlay, P. C. AU - Statham, A. L. AU - Clark, S. J. PY - 2014 DA - 2014// TI - Mining cancer methylomes: prospects and challenges JO - Trends Genet VL - 30 UR - https://doi.org/10.1016/j.tig.2013.11.004 DO - 10.1016/j.tig.2013.11.004 ID - Stirzaker2014 ER -