Table 3 Gene Ontology: Biological Processes for genes associated with hypermethylated gene regions
Accession | Description | Number of genes | Number of input genes | Expected ratio | Observed ratio | P value | Bonferroni P value |
|---|---|---|---|---|---|---|---|
GO:0071103 | DNA conformation change | 248 | 10 | 1.39 | 7.20 | 1.24E-06 | 0.011 |
GO:0006323 | DNA packaging | 165 | 8 | 0.92 | 8.66 | 3.95E-06 | 0.017 |
GO:0031497 | Chromatin assembly | 128 | 7 | 0.72 | 9.77 | 7.44E-06 | 0.021 |
GO:0065004 | Protein-DNA complex assembly | 197 | 8 | 1.10 | 7.26 | 1.45E-05 | 0.031 |
GO:0006333 | Chromatin assembly or disassembly | 153 | 7 | 0.86 | 8.17 | 2.38E-05 | 0.041 |
GO:0006334 | Nucleosome assembly | 111 | 6 | 0.62 | 9.66 | 3.68E-05 | 0.045 |
GO:0071824 | Protein-DNA complex subunit organization | 224 | 8 | 1.25 | 6.38 | 3.65E-05 | 0.045 |