Region/Reported gene(s) | SNP | Loci evaluated in this study | Loci reported in genome-wide association studies | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
 |  | Risk allele | RAF | OR (95% CI)a | P | Genotyping | Risk allele | RAF | OR (95% CI) | P | Reference |
1p11.2/NOTCH2, FCGR1B | rs11249433 | C | 0.04 | 1.11 (0.88-1.40) | 3.8 × 10-1 | Imputed | C | 0.39 | 1.16 (1.09-1.24) | 7 × 10-10 | [8] |
2q35/Intergenic | rs13387042 | A | 0.10 | 1.11 (0.96-1.28) | 1.6 × 10-1 | Imputed | A | 0.50 | 1.2 (1.14-1.26) | 1 × 10-13 | [6] |
3p24.1/SLC4A7 | rs4973768 | T | 0.22 | 1.09 (0.98-1.21) | 1.2 × 10-1 | Imputed | T | 0.47 | 1.16 (1.10-1.24) | 6 × 10-7 | [9] |
5q11.2/MAP3K1 | rs16886165 | G | 0.35 | 1.14 (1.04-1.25) | 6.5 × 10-3 | Imputed | G | 0.15 | 1.23 (1.12-1.35) | 5 × 10-7 | [8] |
 | rs889312 | C | 0.55 | 1.16 (1.06-1.27) | 8.5 × 10-4 | Imputed | C | 0.28 | 1.13 (1.10-1.16) | 7 × 10-20 | [5] |
5p12/MRPS30 | rs7716600 | A | 0.48 | 1.13 (1.03-1.23) | 6.9 × 10-3 | Imputed | A | 0.23 | 1.24 (1.14-1.34) | 7 × 10-7 | [34] |
 | rs4415084 | T | 0.56 | 1.09 (0.99-1.19) | 7.8 × 10-2 | Imputed | T | 0.42 | 1.17 (1.11-1.22) | 8 × 10-11 | [24] |
5p15.2/ROPN1L | rs1092913 | G | 0.30 | 1.11 (1.01-1.22) | 2.8 × 10-2 | Imputed | T | 0.13 | 1.45 (1.24-1.69) | 2 × 10-6 | [35] |
6q22.33/ECHDC1, RNF146 | rs2180341 | G | 0.27 | 1.03 (0.93-1.13) | 6.0 × 10-1 | Typed | G | 0.21 | 1.41 (1.25-1.59) | 3 × 10-8 | [36] |
6q25.1/ESR1, C6orf97 | rs3734805 | C | 0.33 | 1.20 (1.09-1.33) | 1.8 × 10-4 | Imputed | C | 0.08 | 1.19 (1.11-1.27) | 1 × 10-7 | [24] |
 | rs2046210 | A | 0.35 | 1.29 (1.18-1.41) | 5.8 × 10-8 | Typed | A | 0.37 | 1.29 (1.21-1.37) | 2 × 10-15 | [10] |
7q32.3/NR | rs2048672 | C | 0.49 | 1.05 (0.97-1.15) | 2.3 × 10-1 | Typed | C | 0.45 | 1.11 (1.05-1.17) | 6 × 10-6 | [12] |
8q24.21/Intergenic | rs13281615 | C | 0.57 | 1.04 (0.95-1.14) | 3.8 × 10-1 | Imputed | C | 0.40 | 1.08 (1.05-1.11) | 5 × 10-12 | [5] |
 | rs1562430 | T | 0.87 | 1.16 (1.01-1.33) | 3.0 × 10-2 | Imputed | T | 0.58 | 1.17 (1.10-1.25) | 6 × 10-7 | [9] |
9p21.3/CDKN2A, CDKN2B | rs1011970 | T | 0.07 | 1.00 (0.84-1.19) | 9.9 × 10-1 | Imputed | T | 0.17 | 1.09 (1.04-1.14) | 3 × 10-8 | [9] |
9q31.2/KLF4, RAD23B, ACTL7A | rs865686 | T | 0.93 | 1.02 (0.86-1.21) | 8.1 × 10-1 | Imputed | T | 0.61 | 1.12 (1.09-1.18) | 2 × 10-10 | [24] |
10p15.1/ANKRD16, FBXO18 | rs2380205 | C | 0.91 | 1.11 (0.95-1.29) | 1.8 × 10-1 | Typed | C | 0.57 | 1.06 (1.02-1.10) | 5 × 10-7 | [9] |
10q21.2/ZNF365 | rs10995190 | G | 0.98 | 1.02 (0.76-1.38) | 8.9 × 10-1 | Imputed | G | 0.85 | 1.16 (1.10-1.22) | 5 × 10-15 | [9] |
 | rs10822013 | T | 0.47 | 1.06 (0.97-1.15) | 2.1 × 10-1 | Typed | T | 0.47 | 1.12 (1.06-1.18) | 6 × 10-9 | [12] |
10q22.3/ZMIZ1 | rs704010 | A | 0.29 | 1.08 (0.98-1.19) | 1.2 × 10-1 | Typed | A | 0.39 | 1.07 (1.03-1.11) | 4 × 10-9 | [9] |
10q26.13/FGFR2 | rs10510102 | G | 0.18 | 1.01 (0.90-1.13) | 8.4 × 10-1 | Typed | G | 0.17 | 1.12 (1.07-1.17) | 2 × 10-6 | [24] |
 | rs10736303b | G | 0.53 | 1.17 (1.07-1.28) | 4.4 × 10-4 | Typed | T | 0.41 | 1.17 (1.07-1.27) | 2 × 10-10 | [8] |
11p15.5/LSP1 | rs3817198 | C | 0.16 | 1.00 (0.89-1.13) | 9.5 × 10-1 | Typed | C | 0.30 | 1.07 (1.04-1.11) | 3 × 10-9 | [5] |
14q24.1/RAD51L1 | rs10483813c | T | 0.97 | 1.21 (0.93-1.56) | 1.6 × 10-1 | Imputed | C | 0.76 | 1.06 (1.01-1.14) | 2 × 10-7 | [8] |
16q12.1/TOX3 | rs4784227 | T | 0.29 | 1.27 (1.15-1.40) | 1.5 × 10-6 | Typed | T | 0.24 | 1.24 (1.20-1.29) | 1 × 10-28 | [11] |
 | rs3803662 | T | 0.64 | 1.24 (1.14-1.36) | 2.4 × 10-6 | Typed | T | 0.27 | 1.28 (1.21-1.35) | 6 × 10-19 | [5] |
19q13.41/ZNF577 | rs10411161 | C | 0.72 | 1.01 (0.92-1.11) | 8.6 × 10-1 | Typed | T | 0.13 | 1.42 (1.22-1.65) | 7 × 10-6 | [35] |