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Table 5 Selected tests of within-family association with at least one phenotype with P-value ≤0

From: A genome-wide linkage study of mammographic density, a risk factor for breast cancer

Chromosome Marker Nucleotide position Minor allele/MAF in our data PMD_res DA_res NDA_res Allele with higher MD
1 rs1526480 91,209,986 0.39 (G) 0.041 0.71 4.00e-4 A
2 rs715271 57,133,410 0.32 (C) 5.00e-4 0.0019 0.024 A
7 rs723149 46,543,581 0.43 (A) 5.50e-5 2.00e-4 0.035 A
8 rs4317547 141,285,098 0.27 (A) 7.77e-5 .0016 2.00e-4 A
12 rs1012315 97,639,144 0.29 (A) 3.00e-4 7.00e-4 0.018 G
14 rs764602 49,480,419 0.48 (A) 0.022 0.35 3.00e-4 G
14 rs1959064 57,044,005 0.32 (G) 0.036 2.00e-4 0.045 A
20 rs7272911 35,946,239 0.30 (A) 0.0041 0.091 1.00e-4 G