From: Familial relative risks for breast cancer by pathological subtype: a population-based cohort study
Locus | Ref | Genes in/near region | Variant | MAF | ER-negative | ER-positive | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
 |  |  |  |  | Hom- GRR | Het- GRR | FRR* | %FRR†| Hom- GRR | Het- GRR | FRR* | %FRR‡ |
10q26 | [8] | FGFR2 | rs2981582 | 0.38 | 1.18 | 1.08 | 1.0016 | 0.28 | 1.74 | 1.28 | 1.0186 | 3.08 |
16q12 | [8] | TNRC9/TOX3 | rs3803662 | 0.25 | 1.28 | 1.16 | 1.0036 | 0.63 | 1.48 | 1.25 | 1.0089 | 1.48 |
5q11 | [8] | MAP3KI | rs889312 | 0.28 | 1.20 | 1.03 | 1.0009 | 0.16 | 1.26 | 1.12 | 1.0028 | 0.46 |
8q24 | [8] | FAM84B/c-MYC | rs13281615 | 0.40 | 1.09 | 0.99 | 1.0003 | 0.05 | 1.29 | 1.11 | 1.0038 | 0.63 |
11p15 | [8] | LSP1 | rs3817198 | 0.30 | 1.13 | 1.01 | 1.0004 | 0.07 | 1.19 | 1.04 | 1.0010 | 0.17 |
3p24 | [6] | NEK10/SLC4A7 | rs4973768 | 0.46 | 1.12 | 1.06 | 1.0008 | 0.15 | 1.25 | 1.12 | 1.0031 | 0.52 |
17q22 | [6] | COX11 | rs6504950 | 0.27 | 1.06 | 1.03 | 1.0002 | 0.03 | 0.88 | 0.94 | 1.0008 | 0.13 |
10p14 | [32] | CASP8 (D302H) | rs1045485 | 0.13 | 0.82 | 0.95 | 1.0004 | 0.07 | 0.83 | 0.89 | 1.0013 | 0.21 |
2q35 | [62] | TNP1/IGFBP5/IGFBP2/TNS1 | rs13387042 | 0.52 | 1.18 | 1.05 | 1.0018 | 0.31 | 1.29 | 1.08 | 1.0043 | 0.72 |
1p11.2 | [11] | NOTCH2/FCGR1B | rs1124933 | 0.40 | 1.07 | 1.03 | 1.0003 | 0.05 | 1.42 | 1.22 | 1.0078 | 1.30 |
14q24.1 | [11] | RAD51L1 | rs999737 | 0.24 | 0.76 | 1.01 | 1.0005 | 0.09 | 0.69 | 0.93 | 1.0024 | 0.40 |
5p12 | [11] | MRPS30/FGFR10 | rs10941679 | 0.26 | 1.01 | 1.03 | 1.0001 | 0.01 | 1.18 | 1.17 | 1.0027 | 0.46 |
Total | Â | Â | Â | Â | Â | Â | Â | 1.90 | Â | Â | Â | 9.56 |