Table 3 Biological functions over-represented and under-represented in HC11 mammary stem-like cells

Over-represented in stem-like cells

   Cell cycle

90

3.6 × 10^-27

   DNA metabolism

72

1.7 × 10^-23

   RNA metabolism

45

3.2 × 10^-12

   Regulation of cell cycle

36

1.8 × 10^-7

   Chromatin assembly/disassembly

14

2.0 × 10^-5

   Protein amino acid phosphorylation

34

0.008

   Protein metabolism

118

0.01

Under-represented in stem-like cells

   Coenzyme metabolism

15

0.0003

   Cell adhesion

38

0.0007

   Vesicle-mediated transport

20

0.003

   Lipid metabolism

31

0.004

   Epithelial cell differentiation

4

0.005

   Regulation of apoptosis

15

0.005

   Cell differentiation

19

0.03

   Skeletal development

10

0.05

   Regulation of transcription, DNA dependent

72

0.13