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Table 5 Top 20 genes differing between tumor with and without the presence of CD44+/CD24- tumor cells

From: The CD44+/CD24-phenotype is enriched in basal-like breast tumors

Rank Clonea Gene descriptionb Gene symbol Signc
1 1499830 Myocardial infarction associated transcript (nonprotein coding) MIAT -
2 82421 CD44 molecule (Indian blood group) CD44 +
3 2018758 Peroxisomal biogenesis factor 7 PEX7 +
4 320712 Protein kinase, X-linked, pseudogene 1 PRKXP1 -
5 824908 Transmembrane protein 49 TMEM49 -
6 328868 CD44 molecule (Indian blood group) CD44 +
7 1472689 Apolipoprotein C-I APOC1 -
8 126341 Myosin, light chain kinase MYLK +
9 1609752 Apolipoprotein C-I APOC1 -
10 811028 Transmembrane protein 49 TMEM49 -
11 788714 Ataxin 10 ATXN10 +
12 310019 Myosin, light chain kinase MYLK +
13 137296 SEC24 related gene family, member A (S. cerevisiae) SEC24A -
14 32493 Integrin, α6 ITGA6 +
15 754582 Ecotropic viral integration site 2A EVI2A -
16 1159963 Interferon regulatory factor 7 IRF7 -
17 612576 3-Oxoacid CoA transferase 1 OXCT1 +
18 503724 Transcribed locus, strongly similar to NP_034722.1 jun D proto-oncogene (Mus musculus) Unavailable data +
19 810463 Dehydrogenase/reductase (SDR family) member 7B DHRS7B -
20 502067 Lupus brain antigen 1 LBA1 -
  1. aIntegrated Molecular Analysis of Genomes and their Expression (IMAGE) consortium cDNA clone number. bClones mapped using UniGene Build 208 (National Center for Biotechnology Information, Bethesda, Maryland, USA). cGenes are either upregulated (+) or downregulated (-) in tumors containing CD44+/CD24- tumor cells.