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Table 1 IGF1, IGFBP-1 and IGFBP-3 haplotype-tagging SNPs

From: Common genetic variation in IGF1, IGFBP-1, and IGFBP-3 in relation to mammographic density: a cross-sectional study

SNP number

SNP ID

Nucleotide change

Minor allele

Allele frequency

IGF1

    

   Block 1

    

1

rs7965399

C/T

C

3.8

2

rs35767

A/G

A

16.2

   Block 2

    

3

CV11752586

A/G

A

22.5

4

rs1019731

A/C

A

14.6

5

rs2195239

C/G

G

22.7

   Block 3

    

6

CV346219

A/G

G

28.4

7

rs2373722

A/G

A

8.1

8

rs1549593

G/T

T

14.0

9

rs1520220

C/G

G

19.0

10

CV2801104

G/C

G

14.1

   Block 4

    

11

rs2946834

G/A

A

33.1

12

rs764876

C/G

C

25.0

13

rs4764695

A/G

G

49.6

14

rs1996656

A/G

G

17.3

IGFBP-1 and IGFBP-3

    

   Block 1

    

15

CV395979

A/G

G

30.2

16

rs1553009

A/G

A

19.7

17

CV395975

G/C

G

24.1

18

rs2201638

A/G

A

2.5

19

rs1065780

G/A

A

38.5

   Block 2

    

20

rs4988515

C/T

T

4.4

21

rs4619

A/G

G

34.8

22

rs1908751

C/T

T

30.4

23

rs2270628

C/T

T

19.1

   Block 3

    

24

rs3110697

A/G

A

42.7

25

rs2854746

G/C

C

38.1

26

rs2854744

T/G

T

45.0

27

rs2132570

T/G

T

21.4

   Additional SNPsa

    

28

rs6670

T/A

A

21.1

29

rs2453839

T/C

C

19.8

  1. IGF, insulin-like growth factor; IGFBP, insulin-like growth factor binding protein. aAdditional SNPs in IGFBP3 do not fit into any haplotype blocks.