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Table 2 Associations between SNPs in VDR, GC, and CYP24A1 genes and postmenopausal breast cancer riska

From: Vitamin D pathway gene polymorphisms, diet, and risk of postmenopausal breast cancer: a nested case-control study

 

Frequency

Matched only

Multivariate-adjustedb

SNP

Cases

Controls (%)

OR

95% CI

OR

95% CI

VDR

      

Fok1 (rs2228570)

   FF

191

185 (37.0)

1.00

-

1.00

-

   Ff

207

227 (45.4)

0.89

(0.68–1.17)

0.78

(0.58–1.05)

   ff

77

68 (13.6)

1.11

(0.75–1.63)

0.98

(0.65–1.50)

Taq1 (rs731236)

   tt or Tt

336

312 (62.4)

1.00

-

1.00

-

   TT

158

180 (36.0)

0.82

(0.63–1.06)

0.83

(0.62–1.12)

Apa1 (rs7975232)

   AA

147

129 (25.8)

1.00

-

1.00

-

   Aa or aa

341

348 (69.6)

0.87

(0.65–1.15)

0.87

(0.64–1.18)

Bsm1 (rs1544410)

   BB or Bb

321

290 (58.0)

1.00

-

1.00

-

   bb

151

170 (34.0)

0.81

(0.61–1.06)

0.84

(0.62–1.15)

Poly(A) tail

   SS or SL

328

304 (60.8)

1.00

-

1.00

-

   LL

158

177 (35.4)

0.83

(0.63–1.08)

0.83

(0.61–1.12)

GC protein (rs4588)

   C/C

240

246 (51.7)

1.00

-

1.00

-

   A/C

202

186 (39.1)

1.11

(0.84–1.45)

1.11

(0.82–1.48)

   A/A

48

44 (9.2)

1.13

(0.73–1.76)

1.30

(0.80–2.13)

GC protein (rs7041)

   G/G

154

149 (30.4)

1.00

-

1.00

-

   G/T

237

235 (48.0)

0.98

(0.72–1.33)

0.94

(0.67–1.31)

   T/T

103

106 (21.6)

0.94

(0.66–1.33)

0.96

(0.65–1.41)

CYP24A1 (rs2296241)

   A/A

141

139 (28.4)

1.00

-

1.00

-

   A/G

254

253 (51.6)

0.99

(0.74–1.31)

1.03

(0.75–1.41)

   G/G

99

98 (20.0)

1.00

(0.70–1.43)

1.05

(0.71–1.56)

  1. aAll models contain a variable for unknown SNP genotype which is not presented. bModels are adjusted for body mass index, history of breast cyst, hormone replacement therapy use, family history of breast cancer, education, parity and age at first birth combined, age at menarche, and age at menopause. CI, confidence interval; GC, group-specific component; OR, odds ratio; SNP, single-nucleotide polymorphism; VDR, vitamin D receptor.