Skip to main content

Table 2 List of 35 genes able to discriminate between all DCIS and all invasive samples

From: Classification of ductal carcinoma in situ by gene expression profiling

Rank NKI ID Symbol Annotation Accession no.
1 116810 ADM Adrenomedullin AA446120
2 123346   EST H17315
3 117289 MMP11 Matrix metalloproteinase 11 (stromelysin 3) AA045500
4 121066 DAPK3 Death-associated protein kinase 3 AA973730
5 123776 PIAS4 Protein inhibitor of activated STAT protein H30547
6 101837 DHX34 KIAA0134 gene product AA477623
7 102847 YIF1 Putative transmembrane protein; homolog of yeast Golgi membrane protein Yif1p (Yip1p-interacting factor) H79351
8 117345 ACTN1 Actinin, alpha 1 AA669042
9 127755 TGFB2 Transforming growth factor, beta 2 W47556
10 108960 GABRD Gamma-aminobutyric acid (GABA) A receptor, delta H41122
11 108348 MFAP2 Microfibrillar-associated protein 2 N67487
12 129658 MGC13045 DnaJ (Hsp40) homolog, subfamily C, member 4 AA996059
13 105479 BAT3 HLA-B-associated transcript-3 AA434416
14 120649 KCTD5 Hypothetical protein AA521027
15 110728 FBXL15 F-box and leucine-rich repeat protein 15 T61547
16 120934 EIF4G1 Eukaryotic translation initiation factor 4 gamma, 1 R37276
17 118584 C9orf115 ESTs, weakly similar to B36298 proline-rich protein PRB3S [Homo sapiens] AA479713
18 105533 ARF1 ADP-ribosylation factor 1 W45572
19 131909 TUBB2 Tubulin, beta polypeptide AI672565
20 131540 PRPF31 DKFZP566J153 protein AI253017
21 110281 HSPA1L Heat shock 70-kD protein-like 1 H17513
22 107215 KCTD5 Hypothetical protein AA429470
23 121937 FLJ10374 Hypothetical protein FLJ10374 AA676962
24 100368 GNB2 Guanine nucleotide binding protein (G protein), beta polypeptide 2 N68166
25 105453 PSAP Prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) N72215
26 115391 LMCD1 LIM and cysteine-rich domains 1 AA452125
27 128198 MMP11 Matrix metalloproteinase 11 (stromelysin 3) AA954935
28 123688 COL1A1 Collagen, type I, alpha 1 R48844
29 127890 PTMS Parathymosin AA458981
30 102044 DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha) AA406285
31 101067 MAP7 Microtubule-associated protein 7 R77252 | R77251
32 129438 IQGAP1 IQ motif containing GTPase activating protein 1 AA478633
33 125700 APC2 Adenomatous polyposis coli like AA976241
34 127881 NFIC Nuclear factor I/C (CCAAT-binding transcription factor) T59427
35 109065 SYT5 Synaptotagmin V H39018
  1. DCIS, ductal carcinoma in situ; EST, expressed sequence tag; NKI ID, Netherlands Cancer Institute (Amsterdam, The Netherlands) identification number.
\